Add sequence features

Author

Cox Lab

Published

November 15, 2023

1 General

Type: - Matrix Processing
Heading: - Modifications
Source code: AddSequenceFeatures.cs

2 Brief description

Site-specific sequence features are added, which were extracted from UniProt.

3 Parameters

3.1 Proteins

Selected text column containing the Uniprot IDs (default: first text column of the matrix).

3.2 Positions within proteins

Selected text column containing the positions within the proteins to add site-specific features (default: first text column of the matrix). The column is generated by MaxQuant and is called “Positions”.

3.3 Add status column

If checked additional information of Uniprot about the protein sites is added (default: unchecked).